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Publicaciones 2014 Departamento de Oceanografía


Departamento de Oceanografía.



  1. Alarcón-Matus P, Goncalves AT, Valenzuela-Muñoz V, Gallardo-Escárate C. 2014. Modulation of insulin-like receptor gene (MdIR) in response to feeding in the surf clam Mesodesma donacium (Lamarck, 1818). Journal of Molluscan Studies 1-7
  2. Anabalón V, Arístegui J, Morales CE, Andrade I, Benavides M, Correa-Ramírez MA, Espino M, Ettahiri O, Hormazabal S, Makaoui A, Montero MF, Orbi A. 2014. The structure of planktonic communities under variable coastal upwelling conditions off Cape Ghir (31°N) in the Canary Current System (NW Africa). Progress in Oceanography 120: 320−339
  3. Bertrand S, Huguen K, Sepúlveda J, Pantoja S. Late Holocene covariability of the southern westerlies and sea surface temperature in northern Chilean Patagonia.  Quaternary Science Reviews 105: 195-208
  4. Bonicelli J, Moffat C, Navarrete SA, Largier JL, Tapia FJ. 2014. Spatial differences in thermal structure and variability within a small bay: interplay of diurnal winds and tides. Continental Shelf Research 88: 72-80
  5. Bonicelli J, Tapia FJ, Navarrete SA. 2014. Wind-driven diurnal temperature variability across a small bay and the spatial pattern of intertidal barnacle settlement. Journal of Experimental Marine Biology and Ecology 461: 350–356.
  6. Caniupán M, Lamy F, Lange CB, Kaiser J, Kilian R, Arz HW, León T, Mollenhauer G, Sandoval S, De Pol-Holz R, Pantoja S, Wellner J, Tiedemann R. 2014. Holocene sea-surface temperature variability in the Chilean fjord region. Quaternary Research 82: 342-353
  7. Castro-González M, Molina V, Rodríguez-Rubio E, Ulloa O. 2014. The first report of a microdiverse anammox bacteria community in waters of Colombian Pacific, a transition area between prominent oxygen minimum zones of the eastern tropical Pacific. Environmental Microbiology Reports 6: 595–604
  8. Chavez-Mardones J, Gallardo-Escárate C. 2014. Deltamethrin (AlphaMax TM) reveals modulation of genes related to oxidative stress in the ectoparasite Caligus rogercresseyi: Implications on delousing drug effectiveness. Aquaculture 433: 421-429
  9. Chavez-Mardones J, Gallardo-Escárate C. 2014. Immune response of apoptosis-related cysteine peptidases from the red abalones Haliotis rufescens (HrCas8 and HrCas3): Molecular characterization and transcription expression. Fish & Shellfish Immunology 39: 90-98
  10. Cornejo P, Sepúlveda H H, Gutiérrez M H, Olivares G. 2014. Numerical studies on the hydrodynamic effects of a salmon farm in an idealized environment. Aquaculture 430: 195-206
  11. Cubillos LA, Niklitschek EJ, Cahuin S. 2014. Relating a recruitment shift of Patagonian grenadier (Macruronus magellanicus Lönnberg) to large-scale environmental changes off Southern Chile. New Zealand Journal of Marine and Freshwater Research  48: 284-293
  12. Dalsgaard T, Stewart FJ, Thamdrup B, De Brabandere L, Revsbech NP, Ulloa O, Canfield DE, DeLong EF. 2014. Oxygen at nanomolar Levels Reversibly Suppresses Process Rates and Gene Expression in Anammox and Denitrification in the Oxygen Minimum Zone off Northern Chile. mBio 5: 1-14
  13. De Brabandere L, Canfield DE, Dalsgaard T, Friederich GE, Revsbech NP, Ulloa O, Thamdrup B. 2014. Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone. Environmental Microbiology 16: 3041-3054
  14. Díaz-Ochoa JA, Pantoja S. 2014. Solid phase phosphorus species and preservation of fish remains in marine sediments of areas of high primary productivity and oxygen seasonality (36ºS, central South Chile). Geochemical Journal 48: 63-71.
  15. Escribano R, Hidalgo P, Valdés V, Frederick L. 2014. Temperature effects on development and reproduction of copepods in the Humboldt Current: the advantage of rapid growth. Journal of Plankton Research 36: 104−116
  16. Farlora R, Araya-Garay J, Gallardo-Escárate C. 2014. Discovery of sex-related genes trough high-throughput transcriptome sequencing from the salmon louse Caligus regercresseyi. Marine Genomics 15: 85-93
  17. Flores L, Licandeo R, Cubillos L A, Mora E. 2014. Variaciones en la historia de vida de Anadara tuberculosa (Mollusca: Bivalvia) en el ecosistema de manglar de la costa Sur de Ecuador. Revista de Biología Tropical 62: 473–482
  18. Galán A, Faúndez J, Thamdrup B, Santibáñez JF, Farías L. 2014. Temporal dynamics of nitrogen loss in the coastal upwelling ecosystem off central Chile: Evidence of autotrophic denitrification through sulfide oxidation.  Limnology Oceanogr 59: 1865-1878
  19. Gallardo-Escárate C, Valenzuela-Muñoz V, Núñez-Acuña G, Chávez-Mardones J, Maldonado-Aguayo W. 2014. Transcriptome analysis of the couch potato (CPO) protein reveals an expression pattern associated with early development in the salmon louse Caligus rogercresseyi. Gene. 536: 1-8
  20. Gallardo-Escárate C, Valenzuela-Muñoz V, Núñez-Acuña G.2014. RNA-seq analysis using De-Novo Transcriptome Assembly as a Reference for the salmon Louse Caligus rogercresseyi. Plos One 9: 1-17.
  21. Giesecke R, Clement A, Garcés-Vargas J, Mardones J, González HE, Caputo L, Castro L. 2014. Massive salp outbreaks in the inner sea of Chiloé Island (Southern Chile): possible causes and ecological consequences. Am. J. Aquat. Res. 42: 604-621.
  22. Goncalves AT, Farlora R, Gallardo-Escárate C. 2014. Transcriptome survey of the lipid metabolic pathways involved in energy production and ecdysteroid synthesis in the salmon louse Caligus rogercresseyi (Crustacea: Copepoda). Comparative Biochemistry and Physiology 176: 9-17
  23. Iriarte JL, Murat VA, Cuevas LA, González HE, Sánchez N, Myklestad SM. 2014. Size-spectrum based differential response of phytoplankton to nutrient and iron-organic matter combinations in microcosm experiments in a Chilean Patagonian Fjord. Japanese Society of Phycology. 62: 136-146
  24. Iriarte JL, Pantoja S, Daneri G. 2014. Oceanographic processes in Chilean fjords of Patagonia:  From small to large-scale studies. Progress in Oceanography 129: 1–7
  25. Jacob BG, Tapia FJ, Daneri G, Iriarte JL, Montero P, Sobarzo M, Quiñones R. 2014. Springtime size-fractionated primary production across hydrographic and PAR-light gradients in Chilean Patagonia (41–50°S). Progress in Oceanography. 129: 75-84
  26. Levipan HA, Molina V, Fernández C. 2014. Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile 36ºS). Environmental Microbiology Reports 6: 565-573
  27. Llanos-Rivera A, Herrera G, Tarifeño E, Castro LR. 2014. Development of free neuromasts in Engraulis ringens and Strangomera bentincki (Teleostei, Clupeiformes) early larvae. Latin American Journal of Aquatic Research 42: 264-270
  28. Maldonado-Aguayo W, Gallardo-Escárate C. 2014. Increasing transcriptome response of serpins during the ontogenetic stages in the salmon louse Caligus rogercresseyi (Copepoda:Caligadae). Marine Genomics 15: 55-64
  29. Maldonado-Aguayo W, Teneb J, Gallardo-Escárate C. 2014. A galectin with quadruple-domain from red abalone Haliotis rufescens involved in the immune innate response against to Vibrio anguillarum. Fish & Shellfish Immunology 40: 1-8
  30. Mansilla A, Rosenfeld S, Rendoll J, Murcia S, Werlinger C, Yokoya NS, Terrados J. 2014. Tolerance response of Lessonia flavicans from the sub-Antarctic ecoregion of Magallanes under controlled environmental conditions. J Appl Phycol 26: 1971-1977
  31. Medina G, Castro L, Pantoja S. 2014. Fatty acids in Merluccius australis tissues, a comparison between females from inshore and offshore spawning areas in the Chilean Patagonia. Fisheries Research 160: 41-49.
  32. Meerhoff E, Tapia FJ, Castro LR. 2014. Spatial structure of the meroplankton community along a Patagonian fjord – The role changing freshwaters inputs. Progress in Oceanography 129: 125-135
  33. Meerhoff E, Tapia FJ, Sobarzo M, Castro L. 2014. Influence of estuarine and secondary circulation on crustacean larval fluxes: a case study from a Patagonian fjord. Journal of Plankton Research 0: 1–15.
  34. Moffat C. 2014. Wind-Driven modulation of warm water supply to a proglacial fjord, Jorge Montt Glacier, Patagonia. Geophisical Research Letters 41: 3943-3950
  35. Mohtadi M, Prange M, Oppo DW, De Pol-Holz R, Merkel U, Zhang X, Steinke S, Lückge A. 2014. North Atlantic forcing of tropical Indian Ocean climate. Nature 509: 76-80
  36. Morales-Collío K, Valenzuela-Muñoz V, Gallardo-Escárate C. 2014. The Myostatin Gene of Argopecten purpuratus (APMS T N): Transcript expression and single-nucleotide polymorphism differences between wild and hatchery-bred populations. Journal Molluscan Studies. 80: 169-176.
  37. Moreno P, Vilanova I, Villa-Martínez R, Garreaud RD, Rojas M, De Pol-Holz R. 2014. Southern Annular Mode-like changes in southwestern Patagonia at centennial timescales over the last three millennia. Nature Communications 5: 1-7
  38. Murillo AA, Ramírez-Flandes S, DeLong EF, Ulloa O. 2014. Enhanced metabolic versatility of planktonic sulfur-oxidizing y-proteobacteria in an oxygen-deficient coastal ecosystem. Frontiers in Marine Science 1: 1- 13
  39. Neira S, Moloney C, Christensen V, Cury P, Shannon L, Arancibia H. 2014. Analysing changes in the southern Humboldt ecosystem for the period 1970-2004 by means of dynamic food web modelling. Ecological Modelling 274: 41-49
  40. Neira S, Moloney C, Shannon L J, Christensen V, Arancibia H, Jarre A. 2014. Assessing changes in the southern Humboldt in the 20th century using food web models. Ecological Modelling 278: 52-66
  41. Niklitschek E J, Secor D H, Toledo P, Valenzuela X, Cubillos L A, Zuleta A. 2014. Nursery systems for Patagonian grenadier off Western Patagonia: large inner sea or narrow continental shelf?. Ices Journal of Marine Science. 71: 374−390.
  42. Núñez-Acuña G, Gallardo-Escárate C. 2014. The myostatin gene in Mytilus chilensis evidences a high level of polymorphism and ubiquitous transcript expression. Gene 536: 207-212.
  43. Nuñez-Acuña G, Valenzuela-Muñoz V, Gallardo-Escárate C. 2014. High-throughput SNP discovery and transcriptome expression profiles from the salmon louse Caligus rogercresseyi (Copepoda: Caligidae). Comparative Biochemistry and Physiology. 10: 9-21
  44. Ortega KJ, Sáez CA, Macaya EC. 2014. Changes in invertebrate assemblages inhabiting Lessonia spicata (Phaeophyceae) holdfasts after the 2010 earthquake-mediated coastal uplift in Chile. Revista de Biología Marina y Oceanografía 49: 129-134.
  45. Pavés HJ, González HE, Castro L, Iriarte JL. 2014. Carbon flows through the pelagic sub-food web in two basins of the Chilean Patagonian coastal ecosystem: The significance of coastal-ocean connection on ecosystem parameters. Estuaries and coasts. DOI: 10.1007/s12237-014-9780-y
  46. Pérez G, Farías L, Fernández C, Conde D, Piccini C. 2014. Incidence of phytoplankton and environmental conditions on the bacterial ammonium uptake in a subtropical coastal lagoon. Limnol. 73: 106-114
  47. Pérez-Santos I, Garcés-Vargas J, Schneider W, Ross L, Parra S, Valle-Levinson A. 2014. Double-diffusive layering and mixing in Patagonian fjords. Progress in Oceanography 129: 35-49
  48. Pérez-Santos I, Schneider W, Valle-Levinson A, Garcés-Vargas J, Soto I, Montoya-Sánchez R, Melo González N, Müller-Karger F. 2014. Chlorophyll-a patterns and mixing processes in the Yucatan Basin, Caribbean Sea. Ciencias Marinas 40: 11-31
  49. Rain-Franco A, Muñoz C, Fernandez C. 2014. Ammonium Production off Central Chile (36ºS) by Photodegradation of Phytoplankton-Derived and Marine Dissolved Organic Matter. Plos One 9: 1-13
  50. Retamal MA, Angulo A, Olivares T. 2014. On the taxonomical status of the Chilean species of Cancer Linneo, 1758 (Crustacea, Decapoda) and description of the Neotypo of Cancer setosus Molina 1782. World Research Journal of Zoology 1: 1-3
  51. Retamal MA. 2014. There exists a large carcinological biodiversity difference between the Eastern (Cimar 7) and western fjords (Cimar 8) at the southern of Chile. Global Open Journal of Oceans and Oceanography  1: 1-6
  52. Ross L, Pérez-Santos I, Valle-Levinson A, Schneider W. 2014. Semidiurnal internal tides in a Patagonian fjord. Progress in Oeanography 129: 19-34
  53. Saavedra L, Quiñones RA, Becerra J. 2014. Distribution and sources of phytosterols in coastal and river sediments of south-central Chile. Latin american journal of aquatic research 42 61-84
  54. Sánchez G, Lange CB, Flóres JA, Caniupán M, Lamy F. 2014. Cocolitóforos en sedimentos marinos frente a la entrada occidental del Estrecho de Magallanes (53°S) revelan cambios en productividad durante los últimos 30.000 años. Latin American Journal of Aquatic Research 42: 1035- 1049
  55. Schneider W, Pérez-Santos I, Ross L, Bravo L, Seguel R, Hernández F. 2014. On the hydrography of Puyuhuapi channel (Chilean Patagonia). Progress in Oceanography. 129: 8-18
  56. Tapia FJ, Largier JL, Castillo M, Wieters EA, Navarrete SA. 2014. Latitudinal discontinuity in thermal conditions along the nearshore of central-northern Chile. PLoS ONE, 9: 1-11
  57. Tiano L, Garcia-Robledo E, Dalsgaard T, Devol AH, Ward BB, Ulloa O, Canfield DE, Revsbech NP. 2014. Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones. Deep-Sea Research I 94: 173–183
  58. Valenzuela-Muñoz V, Bueno-Ibarra MA, Gallardo-Escárate C. 2014. Characterization of the transcriptomes of Haliotis rufescens reproductive tissues. Aquaculture Research 45: 1026-1040
  59. Valenzuela-Muñoz V, Gallardo-Escárate C. 2014. TLR and IMD signaling pathways from Caligus rogercresseyi (Crustacea: Copepoda): In silico gene expression and SNPs discovery. Fish & Shellfish Immunology. 36: 428-434
  60. Valenzuela-Muñoz V, Nuñez-Acuña G, Gallardo-Escarate C. 2014. Molecular Characterization and Transcription Analysis of P-Glycoprotein Gene from Salmon Louse Caligus regercresseyi. Aquaculture Research & Development 5 1-7
  61. Valle-Levinson A, Cáceres MA, Pizarro O. 2014. Variations of tidally driven three-layer residual circulation in fjords. Ocean Dynamics 64: 459-469
  62. Valle-Levinson A, Castro L, Cáceres M, Pizarro O. 2014. Twilight vertical migrations of zooplankton in a Chilean fjord. Progress in Oceanography 129: 114-124
  63. Völker D, Geersen J, Contreras-Reyes E, Sellanes J, Pantoja S, Rabbel W, Thorwart M, Reichert C, Block M, Reimer Weinrebe W. 2014. Morphology and geology of the continental shelf and upper slope of southern Central Chile (33ºS-43ºS). Int J Earth Sci (Geol Rundsch) 103: 1765-1787


Capítulos de Libros


  1. Stewart FJ, Ulloa O. 2014. Microbial Metagenomics in Oxygen Minimum Zones. En: Marco, D. (Ed.). Metagenomics of the Microbial Nitrogen Cycle: Theory, Methods and Applications. Caister Academic. 17-31.